This is a selection of Stenglein lab papers and papers from earlier in Mark Stenglein's career. For a full list of papers, see these pages on pubmed or google scholar



Assessing Reassortment between Bluetongue Virus Serotypes 10 and 17 at Different Coinfection Ratios in Culicoides sonorenesis

Viruses. 2024 Feb 2;16(2):240

Draft genome sequence of Planococcus sp. SK3692

Microbiol Resour Announc. 2024 Jan 17;13(1):e0054523

Whole-genome sequence of Paenibacillus sp., isolated from soil, Fort Collins, Colorado, USA

Microbiol Resour Announc. 2023 Oct 19;12(10):e0054223

Assessing shared respiratory pathogens between domestic (Ovis aries) and bighorn (Ovis canadensis) sheep; methods for multiplex PCR, amplicon sequencing, and bioinformatics to characterize respiratory flora

PLoS One. 2023 Oct 19;18(10):e0293062

Evaluation of Vector-Enabled Xenosurveillance in Rural Guatemala

Am J Trop Med Hyg. 2023 Oct 16;109(6):1303-1310

In Situ Hybridization (RNAscope) Detection of Bluetongue Virus Serotypes 10 and 17 in Experimentally Co-Infected Culicoides sonorensis

Pathogens. 2023 Sep 30;12(10):1207

A bioinformatics pipeline for a tick pathogen surveillance multiplex amplicon sequencing assay

Ticks Tick Borne Dis. 2023 Sep;14(5):102207

Galbut Virus Infection Minimally Influences Drosophila melanogaster Fitness Traits in a Strain and Sex-Dependent Manner.

Viruses. 2023 Feb 15;15(2):539.

Divergent Serpentoviruses in Free-Ranging Invasive Pythons and Native Colubrids in Southern Florida, United States

Viruses 14(12):2726.

Modeling cellular co-infection and reassortment of bluetongue virus in Culicoides midges

Virus Evol. 2022 Sep 30;8(2):veac094

Rapid evolution of SARS-CoV-2 in domestic cats

Virus Evol. 2022 Sep 30;8(2):veac092

The Case for Studying New Viruses of New Hosts.

Annu Rev Virol. 2022 Jun 7.

Occurrence of Wheat Curl Mite and Mite-Vectored Viruses of Wheat in Colorado and Insights into the Wheat Virome

Plant Dis. 2022 Feb 23

Bluetongue Research at a Crossroads. Modern Genomics Tools Can Pave the Way to New Insights

Annu Rev Anim Biosci. 2022 Feb 15;10:303-324.

Seasonal Dynamics of Mosquito-Borne Viruses in the Southwestern Florida Everglades

Am J Trop Med Hyg. 2022 Jan 10;106(2):610-622

Safety study of Rift Valley Fever human vaccine candidate (DDVax) in mosquitoes.

Transbound Emerg Dis. 2021 Dec 10

SARS-CoV-2 evolution in animals suggests mechanisms for rapid variant selection

Proc Natl Acad Sci U S A. 2021 Nov 2; 118(44):e2105253118.

A Whole Virion Vaccine for COVID-19 Produced via a Novel Inactivation Method and Preliminary Demonstration of Efficacy in an Animal Challenge Model

Vaccines. 2021 Apr 1; 9(4):340.

Genomic characterization of 99 viruses from the bunyavirus families Nairoviridae, Peribunyaviridae, and Phenuiviridae, including 35 previously unsequenced viruses

PLoS Pathog. 2021 Mar 1;17(3):e1009315.

In Vitro Reassortment between Endemic Bluetongue Viruses Features Global Shifts in Segment Frequencies and Preferred Segment Combinations

Microorganisms. 2021 Feb 16;9(2):405

Serpentovirus (Nidovirus) and Orthoreovirus Coinfection in Captive Veiled Chameleons (Chamaeleo calyptratus) with Respiratory Disease

Viruses. 2020 Nov 19;12(11):1329.

The Genetic Diversification of a Single Bluetongue Virus Strain Using an In Vitro Model of Alternating-Host Transmission

Viruses. 2020 Sep 18;12(9):1038.

Cross-Species Transmission and Evolution of SIV Chimpanzee Progenitor Viruses Toward HIV-1 in Humanized Mice

Front Microbiol. 2020 Aug 11;11:1889

Partitiviruses Infecting Drosophila melanogaster and Aedes aegypti Exhibit Efficient Biparental Vertical Transmission

J Virol. 2020 Sep 29;94(20):e01070-20.

A Novel Retrovirus (Gunnison's Prairie Dog Retrovirus) Associated With Thymic Lymphoma in Gunnison's Prairie Dogs in Colorado, USA

Viruses. 2020 Jun 2;12(6):606.

Ecological Dynamics Impacting Bluetongue Virus Transmission in North America

Front Vet Sci. 2020 Apr 17;7:186.

dsRNA-Seq Identification of Viral Infection by Purifying and Sequencing dsRNA

Viruses. 2019 Oct 14;11(10):943.

Longitudinal and Cross-Sectional Sampling of Serpentovirus (Nidovirus) Infection in Captive Snakes Reveals High Prevalence, Persistent Infection, and Increased Mortality in Pythons and Divergent Serpentovirus Infection in Boas and Colubrids

Hoon-Hanks et al 2019 Front. Vet. Sci.

The expectations and challenges of wildlife disease research in the era of genomics: forecasting with a horizon scan-like exercise

Fitak et al 2019 Journal of Heredity

Strengthening the Interaction of the Virology Community with the International Committee on Taxonomy of Viruses (ICTV) by Linking Virus Names and Their Abbreviations to Virus Species

Calisher et al 2018 Syst Biol

A reverse-transcription/RNase H based protocol for depletion of mosquito ribosomal RNA facilitates viral intrahost evolution analysis, transcriptomics and pathogen discovery.

Fauver et al 2018 Virology

Ebola virus, but not Marburg virus, replicates efficiently and without required adaptation in snake cells.

Fedewa et al 2018 Virus Evolution

Co-Infection Patterns in Individual Ixodes scapularis Ticks Reveal Associations between Viral, Eukaryotic and Bacterial Microorganisms

Cross et al 2018 Viruses

Adventitious viruses persistently infect three commonly used mosquito cell lines.

Weger-Lucarelli et al 2018 Virology

Xenosurveillance reflects traditional sampling techniques for the identification of human pathogens: A comparative study in West Africa

Fauver et al 2018 PLoS Negl Trop Dis

Divergent bornaviruses from Australian carpet pythons with neurological disease date the origin of extant Bornaviridae prior to the end-Cretaceous extinction.

Hyndman et al 2018 PLoS Pathogens

Respiratory disease in ball pythons (Python regius) experimentally infected with ball python nidovirus

Hoon-Hanks et al 2018 Virology

Metagenomic Investigation of Idiopathic Meningoencephalomyelitis in Dogs

Hoon-Hanks et al 2017 JVIM

Modeling the evolution of SIV sooty mangabey progenitor virus towards HIV-2 using humanized mice

Schmitt et al 2017 Virology

Differential disease susceptibility in experimentally reptarenavirus infected boa constrictors and ball pythons

Stenglein et al 2017 J Virol

Development and Characterization of Recombinant Virus Generated from a New World Zika Virus Infectious Clone

Weger-Lucarelli, Duggal, et al 2016 J Virol

Detection and prevalence of boid inclusion body disease in collections of boas and pythons using immunological assays.

Chang et al 2016 Vet J

Possibility and Challenges of Conversion of Current Virus Species Names to Linnaean Binomials

Postler et al 2016 Syst Biol

West African Anopheles gambiae mosquitoes harbor a taxonomically diverse virome including new insect-specific flaviviruses, mononegaviruses, and totiviruses

Fauver et al 2016 Virology

Multiplexed Metagenomic Deep Sequencing To Analyze the Composition of High-Priority Pathogen Reagents

Wilson et al 2016 mSystems

West Nile Virus Population Structure, Injury, and Interferon-Stimulated Gene Expression in the Brain From a Fatal Case of Encephalitis.

Grubaugh et al. 2015 OFID

Age and prior blood feeding of Anopheles gambiae influences their susceptibility and gene expression patterns to ivermectin-containing blood meals.

Seaman et al. 2015 BMC Genomics

Widespread Recombination, Reassortment, and Transmission of Unbalanced Compound Viral Genotypes in Natural Arenavirus Infections

Stenglein et al. 2015 PLoS Pathogens

Past, present, and future of arenavirus taxonomy

Radoshitzky et al. 2015 Arch Virol

Genome Sequence of a Bornavirus Recovered from an African Garter Snake (Elapsoidea loveridgei).

Stenglein et al. 2014 Genome Announc.

Ball Python Nidovirus - a Candidate Etiologic Agent for Severe Respiratory Disease in Python regius.

Stenglein et al. 2014 mBio

Polar bear encephalitis - establishment of a comprehensive next-generation pathogen analysis pipeline for captive and free-living wildlife.

Szentiks et al. 2013 J Comp Path

Structural characterization of the glycoprotein GP2 core domain from the CAS virus, a novel arenavirus-like species.

Koellhoffer et al. 2013 JMB

A novel endogenous betaretrovirus group characterized from polar bears (Ursus maritimus) and giant pandas (Ailuropoda melanoleuca).

Mayer et al. 2013 Virology

Complete genome sequence of an astrovirus identified in a domestic rabbit (Oryctolagus cuniculus) with gastroenteritis.

Stenglein et al. 2012 Virol J

Identification, characterization, and in vitro culture of highly divergent arenaviruses from boa constrictors and annulated tree boas - candidate etiological agents for snake inclusion body disease.

Stenglein et al. 2012 mBio

Virus identification in unknown tropical febrile illness cases using deep sequencing.

Yozwiak et al. 2012 PLoS NTD

APOBEC3G contributes to HIV-1 variation through sublethal mutagenesis.

Sadler et al. 2010 J Virol

Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes and tissues - implications for HIV-1 restriction.

Refsland et al. 2010 NAR

APOBEC3 proteins mediate the clearance of foreign DNA from human cells.

Stenglein et al. 2010 Nature Struct Mol Biol

Two regions within the amino-terminal half of APOBEC3G cooperate to determine cytoplasmic localization.

Stenglein et al. 2008 J Virol

The restriction of zoonotic PERV transmission by human APOBEC3G.

Jonsson et al. 2007 PLoS One

Evolutionarily conserved and non-conserved retrovirus restriction activities of artiodactyl APOBEC3F proteins.

Jonsson et al. 2006 NAR

APOBEC3B and APOBEC3F inhibit L1 retrotransposition by a DNA deamination-independent mechanism.

Stenglein and Harris 2006 JBC